Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm15460-201ENSMUST00000118147 391 ntBASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmg20aQ9DC33 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm28630-201ENSMUST00000187806 498 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Shd-206ENSMUST00000225145 998 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Cog3-203ENSMUST00000227473 4197 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hmg20aQ9DC33 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmg20aQ9DC33 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms