Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.33□□□□□ -0.43
Rrp8Q9DB85 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rrp8Q9DB85 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp8Q9DB85 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm11597-201ENSMUST00000121423 964 ntBASIC12.32□□□□□ -0.44
Rrp8Q9DB85 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm9230-201ENSMUST00000188228 532 ntBASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.32□□□□□ -0.44
Rrp8Q9DB85 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp8Q9DB85 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rrp8Q9DB85 Gm12314-201ENSMUST00000118104 538 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms