Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp5Q9D7S9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Chmp5Q9D7S9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp5Q9D7S9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp5Q9D7S9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp5Q9D7S9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Gm23363-201ENSMUST00000175024 79 ntBASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp5Q9D7S9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm22121-201ENSMUST00000175148 54 ntBASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm8463-201ENSMUST00000208573 613 ntBASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm8227-201ENSMUST00000223306 571 ntBASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp5Q9D7S9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm12859-201ENSMUST00000117834 427 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm8099-201ENSMUST00000200510 742 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm8598-201ENSMUST00000221184 836 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Rubie-203ENSMUST00000227803 2430 ntBASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms