Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.65□□□□□ -0.38
Trim42Q9D2H5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trim42Q9D2H5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim42Q9D2H5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Trim42Q9D2H5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim42Q9D2H5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim42Q9D2H5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trim42Q9D2H5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gm29608-201ENSMUST00000190444 463 ntBASIC12.64□□□□□ -0.39
Trim42Q9D2H5 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim42Q9D2H5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Gm43094-201ENSMUST00000196549 921 ntBASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim42Q9D2H5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim42Q9D2H5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms