Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Gm27838-201ENSMUST00000184829 128 ntBASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Chaf1bQ9D0N7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chaf1bQ9D0N7 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.79□□□□□ -0.52
Chaf1bQ9D0N7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chaf1bQ9D0N7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chaf1bQ9D0N7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms