Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Gm32025-201ENSMUST00000217960 307 ntBASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Khdc3Q9CWU5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.08□□□□□ -0.47
Khdc3Q9CWU5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm26927-201ENSMUST00000182385 965 ntBASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Khdc3Q9CWU5 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Khdc3Q9CWU5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms