Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Snord83b-201ENSMUST00000104546 94 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gm14760-201ENSMUST00000121831 999 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gm6745-201ENSMUST00000199216 526 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.78□□□□□ -0.04
Smc3Q9CW03 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Smc3Q9CW03 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Smc3Q9CW03 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smc3Q9CW03 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc3Q9CW03 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc3Q9CW03 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.77□□□□□ -0.04
Smc3Q9CW03 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.77□□□□□ -0.04
Smc3Q9CW03 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.77□□□□□ -0.04
Smc3Q9CW03 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc3Q9CW03 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Gm6244-201ENSMUST00000178732 841 ntBASIC14.77□□□□□ -0.05
Smc3Q9CW03 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.77□□□□□ -0.05
Smc3Q9CW03 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.77□□□□□ -0.05
Smc3Q9CW03 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.77□□□□□ -0.05
Smc3Q9CW03 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Gm10012-201ENSMUST00000078252 192 ntBASIC14.77□□□□□ -0.05
Smc3Q9CW03 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Smc3Q9CW03 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc3Q9CW03 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.76□□□□□ -0.05
Smc3Q9CW03 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Smc3Q9CW03 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.76□□□□□ -0.05
Smc3Q9CW03 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Gm5356-201ENSMUST00000093326 615 ntBASIC14.76□□□□□ -0.05
Smc3Q9CW03 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms