Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Mir686-201ENSMUST00000102174 109 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm5687-201ENSMUST00000118252 640 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm13813-201ENSMUST00000120998 787 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm11978-201ENSMUST00000122315 466 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm45668-201ENSMUST00000211271 493 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Gm2423-201ENSMUST00000074863 733 ntBASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska1Q9CPV1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm16202-201ENSMUST00000117532 544 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm6152-201ENSMUST00000151704 340 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm9630-201ENSMUST00000178304 885 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm18473-201ENSMUST00000220543 868 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska1Q9CPV1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska1Q9CPV1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms