Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Gm29127-201ENSMUST00000188304 517 ntBASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Gm38092-201ENSMUST00000195600 653 ntBASIC14.34□□□□□ -0.11
Trim11Q99PQ2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim11Q99PQ2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim11Q99PQ2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim11Q99PQ2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim11Q99PQ2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Gm13492-201ENSMUST00000119772 665 ntBASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.33□□□□□ -0.12
Trim11Q99PQ2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim11Q99PQ2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gm16177-201ENSMUST00000120728 718 ntBASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gm27682-201ENSMUST00000183930 110 ntBASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gm43818-201ENSMUST00000200605 466 ntBASIC14.32□□□□□ -0.12
Trim11Q99PQ2 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Trim11Q99PQ2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm12384-201ENSMUST00000119228 919 ntBASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm1335-201ENSMUST00000121653 386 ntBASIC14.31□□□□□ -0.12
Trim11Q99PQ2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms