Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.49■□□□□ 0.07
Trim34aQ99PP6 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Trim34aQ99PP6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim34aQ99PP6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm24231-201ENSMUST00000104315 133 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm11989-201ENSMUST00000117240 672 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm9062-201ENSMUST00000117712 727 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12616-201ENSMUST00000118594 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm11362-201ENSMUST00000118838 850 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Mir1943-201ENSMUST00000158276 73 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12624-201ENSMUST00000177615 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12621-201ENSMUST00000177760 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12615-201ENSMUST00000177970 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12622-201ENSMUST00000177975 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12627-201ENSMUST00000178412 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12625-201ENSMUST00000179122 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12614-201ENSMUST00000179586 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm12613-201ENSMUST00000180323 382 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm19994-201ENSMUST00000217086 586 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim34aQ99PP6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim34aQ99PP6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim34aQ99PP6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim34aQ99PP6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms