Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Gm43758-201ENSMUST00000199500 367 ntBASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2ird2Q99NI3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2ird2Q99NI3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2ird2Q99NI3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2ird2Q99NI3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2ird2Q99NI3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2ird2Q99NI3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Gtf2ird2Q99NI3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2ird2Q99NI3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.94□□□□□ -0.34
Gtf2ird2Q99NI3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms