Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm22018-201ENSMUST00000104357 131 ntBASIC12.27□□□□□ -0.45
Msh4Q99MT2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Gm45880-201ENSMUST00000213041 853 ntBASIC12.27□□□□□ -0.45
Msh4Q99MT2 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.27□□□□□ -0.45
Msh4Q99MT2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Snora73a-201ENSMUST00000082453 205 ntBASIC12.27□□□□□ -0.45
Msh4Q99MT2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.27□□□□□ -0.45
Msh4Q99MT2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msh4Q99MT2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.26□□□□□ -0.45
Msh4Q99MT2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.26□□□□□ -0.45
Msh4Q99MT2 Gm37042-201ENSMUST00000193816 581 ntBASIC12.26□□□□□ -0.45
Msh4Q99MT2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.26□□□□□ -0.45
Msh4Q99MT2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Msh4Q99MT2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms