Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm8515-201ENSMUST00000194852 576 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm6180-201ENSMUST00000065243 498 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap3Q99LM2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm12203-201ENSMUST00000118235 598 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm12209-201ENSMUST00000120089 596 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm23984-201ENSMUST00000157139 203 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm45384-201ENSMUST00000210451 277 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap3Q99LM2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap3Q99LM2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Gm15703-201ENSMUST00000120250 880 ntBASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Gm11918-201ENSMUST00000121660 179 ntBASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap3Q99LM2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms