Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 BC043934-202ENSMUST00000185694 2356 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Matn2-203ENSMUST00000226766 3252 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm27731-201ENSMUST00000185192 107 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm37497-201ENSMUST00000195830 798 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.18□□□□□ -0.46
Vmp1Q99KU0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gm13369-201ENSMUST00000119442 987 ntBASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gm14660-201ENSMUST00000119809 575 ntBASIC12.17□□□□□ -0.46
Vmp1Q99KU0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gm40466-201ENSMUST00000212174 422 ntBASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms