Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Gm38092-201ENSMUST00000195600 653 ntBASIC11.47□□□□□ -0.57
Lims1Q99JW4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.47□□□□□ -0.57
Lims1Q99JW4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lims1Q99JW4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.47□□□□□ -0.57
Lims1Q99JW4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Lims1Q99JW4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm12203-201ENSMUST00000118235 598 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm12209-201ENSMUST00000120089 596 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm24196-201ENSMUST00000179161 110 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm10012-201ENSMUST00000078252 192 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Gm24136-201ENSMUST00000083374 165 ntBASIC11.46□□□□□ -0.57
Lims1Q99JW4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Lims1Q99JW4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.46□□□□□ -0.58
Lims1Q99JW4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lims1Q99JW4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.45□□□□□ -0.58
Lims1Q99JW4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms