Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm2546-201ENSMUST00000182630 991 ntBASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm37201-201ENSMUST00000191845 523 ntBASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm37489-201ENSMUST00000191883 159 ntBASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm18935-201ENSMUST00000212692 664 ntBASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gm8227-201ENSMUST00000223306 571 ntBASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Morn2-202ENSMUST00000227729 656 ntBASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha9Q91Y11 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm4986-201ENSMUST00000119731 549 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm13875-201ENSMUST00000120162 282 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.36□□□□□ -0.27
Pcdha9Q91Y11 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha9Q91Y11 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 904.1 ms