Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm38195-201ENSMUST00000194247 1499 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm4887-201ENSMUST00000122230 1053 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm17046-201ENSMUST00000168078 850 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm28466-201ENSMUST00000190678 659 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm43818-201ENSMUST00000200605 466 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhb20Q91XZ9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm12731-201ENSMUST00000120932 268 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm45784-201ENSMUST00000188360 142 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 AC157654.1-201ENSMUST00000224130 820 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms