Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim60Q8VI40 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Nupl1-206ENSMUST00000225111 2936 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13□□□□□ -0.33
Trim60Q8VI40 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim60Q8VI40 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13□□□□□ -0.33
Trim60Q8VI40 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13□□□□□ -0.33
Trim60Q8VI40 Gm6473-201ENSMUST00000188572 1210 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13□□□□□ -0.33
Trim60Q8VI40 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 AC159006.1-201ENSMUST00000226396 258 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim60Q8VI40 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim60Q8VI40 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13□□□□□ -0.33
Trim60Q8VI40 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trim60Q8VI40 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Gm19817-201ENSMUST00000199764 2132 ntBASIC13□□□□□ -0.33
Trim60Q8VI40 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim60Q8VI40 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm4768-201ENSMUST00000206199 686 ntBASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm17794-201ENSMUST00000220252 955 ntBASIC12.99□□□□□ -0.33
Trim60Q8VI40 Gm8227-201ENSMUST00000223306 571 ntBASIC12.99□□□□□ -0.33
Trim60Q8VI40 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim60Q8VI40 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms