Protein–RNA interactions for Protein: Q8VCH8

Ubxn4, UBX domain-containing protein 4, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn4Q8VCH8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubxn4Q8VCH8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubxn4Q8VCH8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubxn4Q8VCH8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubxn4Q8VCH8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubxn4Q8VCH8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ubxn4Q8VCH8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubxn4Q8VCH8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Gm11618-201ENSMUST00000117946 267 ntBASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Gm23363-201ENSMUST00000175024 79 ntBASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubxn4Q8VCH8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gm8099-201ENSMUST00000200510 742 ntBASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubxn4Q8VCH8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubxn4Q8VCH8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms