Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm4768-201ENSMUST00000206199 686 ntBASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Lsm1Q8VC85 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Lsm1Q8VC85 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.08□□□□□ -0.47
Lsm1Q8VC85 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Gm4271-201ENSMUST00000174444 973 ntBASIC12.08□□□□□ -0.48
Lsm1Q8VC85 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Gm27390-201ENSMUST00000184516 176 ntBASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Gm27892-201ENSMUST00000185017 106 ntBASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Gm19163-201ENSMUST00000223313 780 ntBASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm1Q8VC85 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm22331-201ENSMUST00000158066 136 ntBASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm29705-201ENSMUST00000212598 474 ntBASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms