Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc9Q8VC31 Gm43375-201ENSMUST00000196705 2480 ntBASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc9Q8VC31 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Gm13365-201ENSMUST00000121188 973 ntBASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Gm37935-201ENSMUST00000192012 982 ntBASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc9Q8VC31 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Gm37422-201ENSMUST00000193794 4718 ntBASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Mir6990-201ENSMUST00000183724 91 ntBASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc9Q8VC31 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms