Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vps39Q8R5L3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.62□□□□□ -0.39
Vps39Q8R5L3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm27331-201ENSMUST00000183705 60 ntBASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm19184-201ENSMUST00000196798 928 ntBASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.61□□□□□ -0.39
Vps39Q8R5L3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps39Q8R5L3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm12490-201ENSMUST00000120255 560 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps39Q8R5L3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps39Q8R5L3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms