Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup35Q8R4R6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.25□□□□□ -0.77
Nup35Q8R4R6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Cog3-203ENSMUST00000227473 4197 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Mir7684-201ENSMUST00000183858 60 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nup35Q8R4R6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Gm15321-201ENSMUST00000121290 288 ntBASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Gm14719-201ENSMUST00000121891 340 ntBASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.23□□□□□ -0.77
Nup35Q8R4R6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.23□□□□□ -0.77
Nup35Q8R4R6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms