Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm23949-201ENSMUST00000104027 127 ntBASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm5616-201ENSMUST00000165252 384 ntBASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm8741-201ENSMUST00000174736 384 ntBASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm24514-201ENSMUST00000174961 285 ntBASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm7848-201ENSMUST00000210739 718 ntBASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Gm19994-201ENSMUST00000217086 586 ntBASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp7Q8R1T1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm24934-201ENSMUST00000103764 111 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm24231-201ENSMUST00000104315 133 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm11989-201ENSMUST00000117240 672 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm11362-201ENSMUST00000118838 850 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Spcs1-203ENSMUST00000226374 592 ntBASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Chmp7Q8R1T1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Mir1943-201ENSMUST00000158276 73 ntBASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp7Q8R1T1 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm13611-201ENSMUST00000118269 318 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp7Q8R1T1 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms