Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm8062-201ENSMUST00000139696 444 ntBASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm19309-201ENSMUST00000218295 205 ntBASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rfwd3Q8CIK8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm22018-201ENSMUST00000104357 131 ntBASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm7809-201ENSMUST00000153199 742 ntBASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm37008-201ENSMUST00000195712 319 ntBASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm19184-201ENSMUST00000196798 928 ntBASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.85□□□□□ -0.51
Rfwd3Q8CIK8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfwd3Q8CIK8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfwd3Q8CIK8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.84□□□□□ -0.51
Rfwd3Q8CIK8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfwd3Q8CIK8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfwd3Q8CIK8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfwd3Q8CIK8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms