Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.48■□□□□ 0.23
Rsph6aQ8CDR2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rsph6aQ8CDR2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Mir5132-201ENSMUST00000175166 71 ntBASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Gm7003-201ENSMUST00000195089 312 ntBASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Gm45166-201ENSMUST00000209073 683 ntBASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rsph6aQ8CDR2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm7857-201ENSMUST00000117957 358 ntBASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm19187-201ENSMUST00000206781 892 ntBASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gm19994-201ENSMUST00000217086 586 ntBASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.46■□□□□ 0.23
Rsph6aQ8CDR2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rsph6aQ8CDR2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rsph6aQ8CDR2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm13296-201ENSMUST00000117854 997 ntBASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm3344-201ENSMUST00000169610 603 ntBASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm45598-202ENSMUST00000210719 986 ntBASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rsph6aQ8CDR2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rsph6aQ8CDR2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms