Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm4986-201ENSMUST00000119731 549 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm13342-201ENSMUST00000121055 207 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm9022-201ENSMUST00000182482 992 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm2546-201ENSMUST00000182630 991 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm37489-201ENSMUST00000191883 159 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm39404-201ENSMUST00000216350 313 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc60Q8C4J0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm13297-201ENSMUST00000120205 934 ntBASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Morn2-202ENSMUST00000227729 656 ntBASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc60Q8C4J0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc60Q8C4J0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm12058-201ENSMUST00000118614 437 ntBASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Mir1938-201ENSMUST00000158746 100 ntBASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccdc60Q8C4J0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms