Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm27320-201ENSMUST00000184892 109 ntBASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim47Q8C0E3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim47Q8C0E3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim47Q8C0E3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim47Q8C0E3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim47Q8C0E3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.96□□□□□ -0.18
Trim47Q8C0E3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim47Q8C0E3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim47Q8C0E3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm20482-202ENSMUST00000174729 825 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm8712-201ENSMUST00000221090 701 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim47Q8C0E3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm13570-201ENSMUST00000140763 309 ntBASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm6082-201ENSMUST00000215204 454 ntBASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms