Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Gm32999-201ENSMUST00000192693 562 ntBASIC17.68■□□□□ 0.42
Usp47Q8BY87 Gm44651-201ENSMUST00000207343 372 ntBASIC17.68■□□□□ 0.42
Usp47Q8BY87 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp47Q8BY87 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Gm8038-201ENSMUST00000164674 2044 ntBASIC17.68■□□□□ 0.42
Usp47Q8BY87 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp47Q8BY87 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Gm13296-201ENSMUST00000117854 997 ntBASIC17.67■□□□□ 0.42
Usp47Q8BY87 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp47Q8BY87 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm11439-201ENSMUST00000118598 409 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm14017-201ENSMUST00000121934 386 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm9230-201ENSMUST00000188228 532 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm37666-201ENSMUST00000194110 866 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 AC154252.2-201ENSMUST00000223593 767 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Mir433-201ENSMUST00000093564 124 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm13996-201ENSMUST00000118456 430 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp47Q8BY87 Gm9630-201ENSMUST00000178304 885 ntBASIC17.66■□□□□ 0.42
Usp47Q8BY87 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms