Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf7Q8BTV2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Mir6392-201ENSMUST00000184924 108 ntBASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf7Q8BTV2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Gm28693-202ENSMUST00000190758 331 ntBASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf7Q8BTV2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf7Q8BTV2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms