Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm9899-201ENSMUST00000065519 555 ntBASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cpsf4Q8BQZ5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cpsf4Q8BQZ5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm22018-201ENSMUST00000104357 131 ntBASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm5370-201ENSMUST00000187187 574 ntBASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cpsf4Q8BQZ5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms