Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm22920-201ENSMUST00000102175 109 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm12516-201ENSMUST00000120819 385 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm15566-201ENSMUST00000121130 590 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm5714-201ENSMUST00000197343 566 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Matn2-206ENSMUST00000228570 2798 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col16a1Q8BLX7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm13916-201ENSMUST00000117368 628 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm38117-201ENSMUST00000194653 939 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm19091-201ENSMUST00000208120 978 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm6867-201ENSMUST00000219165 425 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Grk6-205ENSMUST00000224653 2976 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm7537-201ENSMUST00000221660 1414 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm23912-201ENSMUST00000104687 87 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm4034-201ENSMUST00000187674 480 ntBASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Col16a1Q8BLX7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms