Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gm23912-201ENSMUST00000104687 87 ntBASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gm4993-201ENSMUST00000118719 1174 ntBASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gm23153-201ENSMUST00000175323 313 ntBASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gm4034-201ENSMUST00000187674 480 ntBASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Gm15207-201ENSMUST00000119259 442 ntBASIC17.55■□□□□ 0.4
Usp54Q8BL06 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC17.55■□□□□ 0.4
Usp54Q8BL06 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Gm44158-201ENSMUST00000203881 505 ntBASIC17.55■□□□□ 0.4
Usp54Q8BL06 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.55■□□□□ 0.4
Usp54Q8BL06 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp54Q8BL06 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Gm13937-201ENSMUST00000121000 988 ntBASIC17.54■□□□□ 0.4
Usp54Q8BL06 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC17.54■□□□□ 0.4
Usp54Q8BL06 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Gm25072-201ENSMUST00000175233 235 ntBASIC17.54■□□□□ 0.4
Usp54Q8BL06 Gm3671-201ENSMUST00000182463 1007 ntBASIC17.54■□□□□ 0.4
Usp54Q8BL06 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Gm3765-201ENSMUST00000130985 1447 ntBASIC17.54■□□□□ 0.4
Usp54Q8BL06 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp54Q8BL06 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm37028-201ENSMUST00000194276 107 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm44260-201ENSMUST00000204946 2094 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm37513-201ENSMUST00000194830 2268 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm38378-201ENSMUST00000195153 2268 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 CT009489.1-201ENSMUST00000227740 1893 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm12419-201ENSMUST00000116649 636 ntBASIC17.53■□□□□ 0.4
Usp54Q8BL06 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms