Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SynbQ8BI41 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SynbQ8BI41 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.06□□□□□ -0.48
SynbQ8BI41 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gm14726-201ENSMUST00000120623 896 ntBASIC12.06□□□□□ -0.48
SynbQ8BI41 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.06□□□□□ -0.48
SynbQ8BI41 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SynbQ8BI41 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.06□□□□□ -0.48
SynbQ8BI41 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.06□□□□□ -0.48
SynbQ8BI41 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.06□□□□□ -0.48
SynbQ8BI41 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SynbQ8BI41 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.05□□□□□ -0.48
SynbQ8BI41 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.05□□□□□ -0.48
SynbQ8BI41 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.05□□□□□ -0.48
SynbQ8BI41 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.05□□□□□ -0.48
SynbQ8BI41 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynbQ8BI41 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms