Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm16007-201ENSMUST00000117837 286 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm6222-201ENSMUST00000120787 396 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm11404-201ENSMUST00000120872 494 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm16563-201ENSMUST00000162673 423 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Mir7085-201ENSMUST00000184353 66 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 AC156795.1-201ENSMUST00000214655 414 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm5080-201ENSMUST00000220341 743 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm16476-201ENSMUST00000221544 139 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 AC134439.2-201ENSMUST00000221950 467 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 AC160991.2-201ENSMUST00000223784 1135 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Dupd1-202ENSMUST00000224735 548 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm10229-201ENSMUST00000089106 570 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Gm9839-201ENSMUST00000195252 1437 ntBASIC13.62□□□□□ -0.23
Skida1Q80YR3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Skida1Q80YR3 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 BC085271-201ENSMUST00000191852 1487 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Trp63-206ENSMUST00000115307 1782 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gm12931-201ENSMUST00000117046 324 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gm9522-201ENSMUST00000182394 926 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gm18635-201ENSMUST00000199020 1060 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 CT025603.4-201ENSMUST00000225777 413 ntBASIC13.61□□□□□ -0.23
Skida1Q80YR3 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Skida1Q80YR3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms