Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh8Q7TSK3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm38092-201ENSMUST00000195600 653 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh8Q7TSK3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm2383-201ENSMUST00000181461 807 ntBASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Mir339-201ENSMUST00000083659 96 ntBASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh8Q7TSK3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.42□□□□□ -0.42
Pcdh8Q7TSK3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms