Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm13035-201ENSMUST00000117496 342 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm6161-201ENSMUST00000121942 1102 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm6153-201ENSMUST00000172004 1058 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm37246-201ENSMUST00000192665 835 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm5641-202ENSMUST00000198699 1080 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Ntng1-201ENSMUST00000051253 327 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm9279-201ENSMUST00000223175 1606 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm37835-201ENSMUST00000193305 361 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm12899-201ENSMUST00000120565 551 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 AC122876.1-201ENSMUST00000217619 825 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm14371-201ENSMUST00000138925 1518 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm25517-201ENSMUST00000083865 134 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm12029-201ENSMUST00000120073 832 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Gm6407-201ENSMUST00000176468 549 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 AC159205.5-202ENSMUST00000224849 386 ntBASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Syne1Q6ZWR6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms