Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm10774-201ENSMUST00000188689 204 ntBASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx55Q6ZPL9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm14724-201ENSMUST00000118400 537 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm8199-201ENSMUST00000121323 823 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm8100-201ENSMUST00000182906 988 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx55Q6ZPL9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms