Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm7851-201ENSMUST00000117574 323 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm15595-201ENSMUST00000120840 961 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm14993-201ENSMUST00000121180 164 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm2965-201ENSMUST00000198365 343 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm25053-201ENSMUST00000103982 133 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm25922-201ENSMUST00000104281 130 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms