Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm15703-201ENSMUST00000120250 880 ntBASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm17391-201ENSMUST00000171036 126 ntBASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm43962-201ENSMUST00000203898 190 ntBASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Snrnp40Q6PE01 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm7851-201ENSMUST00000117574 323 ntBASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm19994-201ENSMUST00000217086 586 ntBASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm270-201ENSMUST00000223010 976 ntBASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Snrnp40Q6PE01 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms