Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13453-201ENSMUST00000118708 357 ntBASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Gm37935-201ENSMUST00000192012 982 ntBASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Gm18905-201ENSMUST00000205454 928 ntBASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf220Q6PDX6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm43575-201ENSMUST00000196420 516 ntBASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf220Q6PDX6 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Gm38294-201ENSMUST00000192831 381 ntBASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf220Q6PDX6 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms