Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp49Q6P9L4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Gm13315-201ENSMUST00000120376 991 ntBASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Gm27514-201ENSMUST00000183692 110 ntBASIC14.07□□□□□ -0.16
Usp49Q6P9L4 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp49Q6P9L4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp49Q6P9L4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Gm13492-201ENSMUST00000119772 665 ntBASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Rmrp-201ENSMUST00000157463 271 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms