Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Daam2-202ENSMUST00000224595 1926 ntBASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gm7488-201ENSMUST00000117148 684 ntBASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.07□□□□□ -0.16
Tpm4Q6IRU2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Gm27437-201ENSMUST00000183429 107 ntBASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Gm38671-201ENSMUST00000200573 130 ntBASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm4Q6IRU2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm11618-201ENSMUST00000117946 267 ntBASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm4Q6IRU2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms