Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm19931-201ENSMUST00000198920 368 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm17827-201ENSMUST00000211825 742 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 AC132881.2-201ENSMUST00000225474 709 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm44863-201ENSMUST00000207613 1422 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm11989-201ENSMUST00000117240 672 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm11362-201ENSMUST00000118838 850 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm12196-201ENSMUST00000120954 262 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm15881-201ENSMUST00000148792 942 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm23153-201ENSMUST00000175323 313 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm18038-201ENSMUST00000197900 485 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Scaf8Q6DID3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Rmrp-201ENSMUST00000157463 271 ntBASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm9358-201ENSMUST00000183067 927 ntBASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm45550-201ENSMUST00000209380 946 ntBASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm45398-201ENSMUST00000210561 165 ntBASIC14.72□□□□□ -0.05
Scaf8Q6DID3 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.72□□□□□ -0.05
Scaf8Q6DID3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms