Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.34□□□□□ -0.27
Scube3Q66PY1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm29396-201ENSMUST00000185659 716 ntBASIC13.34□□□□□ -0.27
Scube3Q66PY1 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm18827-201ENSMUST00000188341 790 ntBASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.34□□□□□ -0.27
Scube3Q66PY1 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scube3Q66PY1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Scube3Q66PY1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scube3Q66PY1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scube3Q66PY1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Scube3Q66PY1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Scube3Q66PY1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm37751-201ENSMUST00000192440 1198 ntBASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm8227-201ENSMUST00000223306 571 ntBASIC13.33□□□□□ -0.28
Scube3Q66PY1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC13.33□□□□□ -0.28
Scube3Q66PY1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Scube3Q66PY1 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms