Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ift88Q61371 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.91□□□□□ -0.18
Ift88Q61371 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift88Q61371 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ift88Q61371 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ift88Q61371 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ift88Q61371 Snord83b-201ENSMUST00000104546 94 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Gm11803-201ENSMUST00000119966 444 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.9□□□□□ -0.18
Ift88Q61371 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 Gm16296-201ENSMUST00000159905 325 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 Gm8810-201ENSMUST00000172895 754 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 Gm5866-201ENSMUST00000177881 973 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 Gm7063-201ENSMUST00000186840 981 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.9□□□□□ -0.18
Ift88Q61371 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ift88Q61371 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.9□□□□□ -0.18
Ift88Q61371 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ift88Q61371 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ift88Q61371 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ift88Q61371 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ift88Q61371 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ift88Q61371 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
Ift88Q61371 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.89□□□□□ -0.19
Ift88Q61371 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.89□□□□□ -0.19
Ift88Q61371 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm13369-201ENSMUST00000119442 987 ntBASIC13.89□□□□□ -0.19
Ift88Q61371 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.89□□□□□ -0.19
Ift88Q61371 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ift88Q61371 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.89□□□□□ -0.19
Ift88Q61371 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.89□□□□□ -0.19
Ift88Q61371 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm37497-201ENSMUST00000195830 798 ntBASIC13.89□□□□□ -0.19
Ift88Q61371 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.89□□□□□ -0.19
Ift88Q61371 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ift88Q61371 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.89□□□□□ -0.19
Ift88Q61371 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ift88Q61371 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ift88Q61371 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ift88Q61371 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms