Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.1■□□□□ 0.01
Mre11Q61216 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Mre11Q61216 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Mre11Q61216 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.1■□□□□ 0.01
Mre11Q61216 Gm12485-201ENSMUST00000119641 291 ntBASIC15.1■□□□□ 0.01
Mre11Q61216 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC15.1■□□□□ 0.01
Mre11Q61216 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC15.1■□□□□ 0.01
Mre11Q61216 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Gm27533-201ENSMUST00000183800 152 ntBASIC15.1■□□□□ 0.01
Mre11Q61216 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Mre11Q61216 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.1■□□□□ 0.01
Mre11Q61216 AC154828.2-201ENSMUST00000220908 1070 ntBASIC15.1■□□□□ 0.01
Mre11Q61216 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Mre11Q61216 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Mre11Q61216 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC15.1■□□□□ 0.01
Mre11Q61216 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Mre11Q61216 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Mre11Q61216 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mre11Q61216 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Mre11Q61216 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Mre11Q61216 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Mre11Q61216 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.09■□□□□ 0.01
Mre11Q61216 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.09■□□□□ 0.01
Mre11Q61216 Mir6990-201ENSMUST00000183724 91 ntBASIC15.09■□□□□ 0.01
Mre11Q61216 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.09■□□□□ 0.01
Mre11Q61216 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Mre11Q61216 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Mre11Q61216 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 Gm45677-201ENSMUST00000209975 1341 ntBASIC15.09■□□□□ 0.01
Mre11Q61216 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Mre11Q61216 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Mre11Q61216 Gm43417-201ENSMUST00000201586 5207 ntBASIC15.09■□□□□ 0.01
Mre11Q61216 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mre11Q61216 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mre11Q61216 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.08■□□□□ 0.01
Mre11Q61216 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mre11Q61216 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mre11Q61216 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mre11Q61216 Gm14701-201ENSMUST00000117156 348 ntBASIC15.08■□□□□ 0
Mre11Q61216 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Mre11Q61216 Gm12291-201ENSMUST00000121627 311 ntBASIC15.08■□□□□ 0
Mre11Q61216 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.08■□□□□ 0
Mre11Q61216 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.08■□□□□ 0
Mre11Q61216 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.08■□□□□ 0
Mre11Q61216 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC15.08■□□□□ 0
Mre11Q61216 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Mre11Q61216 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.08■□□□□ 0
Mre11Q61216 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mre11Q61216 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mre11Q61216 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.08■□□□□ 0
Mre11Q61216 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Mre11Q61216 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Mre11Q61216 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mre11Q61216 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms