Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Gm14644-201ENSMUST00000116671 647 ntBASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Gm8494-201ENSMUST00000178171 1233 ntBASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Gm45003-201ENSMUST00000205875 2158 ntBASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim41Q5NCC3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Grk6-205ENSMUST00000224653 2976 ntBASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Gm32999-201ENSMUST00000192693 562 ntBASIC21.84■■□□□ 1.09
Trim41Q5NCC3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim41Q5NCC3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Gm3765-201ENSMUST00000130985 1447 ntBASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Mir483-201ENSMUST00000093631 73 ntBASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim41Q5NCC3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC21.83■■□□□ 1.08
Trim41Q5NCC3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim41Q5NCC3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim41Q5NCC3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim41Q5NCC3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim41Q5NCC3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Mir181d-201ENSMUST00000102383 72 ntBASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm12165-201ENSMUST00000117047 342 ntBASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm45878-201ENSMUST00000211839 241 ntBASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm6991-201ENSMUST00000218475 1178 ntBASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms