Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm11618-201ENSMUST00000117946 267 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm22331-201ENSMUST00000158066 136 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm8810-201ENSMUST00000172895 754 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm6266-201ENSMUST00000203844 806 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm10012-201ENSMUST00000078252 192 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm6091-201ENSMUST00000098307 165 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.45□□□□□ -0.42
Scn2bQ56A07 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn2bQ56A07 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Gm11803-201ENSMUST00000119966 444 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Gm14704-201ENSMUST00000120300 874 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Gm24644-201ENSMUST00000157114 139 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.44□□□□□ -0.42
Scn2bQ56A07 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn2bQ56A07 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.43□□□□□ -0.42
Scn2bQ56A07 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms