Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gm3332-201ENSMUST00000189337 928 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gm43778-201ENSMUST00000199438 199 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gm45120-201ENSMUST00000208880 408 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gm10288-201ENSMUST00000084614 537 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm42937-201ENSMUST00000197360 752 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm42779-201ENSMUST00000198807 406 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Mir483-201ENSMUST00000093631 73 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fam196aQ3USH1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm11956-201ENSMUST00000119525 512 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm8199-201ENSMUST00000121323 823 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Mir1956-201ENSMUST00000157748 65 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm2965-201ENSMUST00000198365 343 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm19640-201ENSMUST00000214849 464 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Gm19994-201ENSMUST00000217086 586 ntBASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fam196aQ3USH1 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms